Lactuca serriola mRNA-Seq IGA reads processing

bash-2.03$
tclsh8.4 tcl_solexa_qseq_parser_2010_01_20.tcl
100205_SOLEXA3_PEFC61CWKAAXX_Ser.L_6_2.QSEQ
100205_SOLEXA3_PEFC61CWKAAXX_Ser.L_6_2.QSEQ.Parsed
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-rw-r--r--   1 akozik   rwm          517 Mar  3 15:42 00_README_00
-rw-r--r--   1 akozik   rwm      5163876514 Mar  2 17:49 100205_SOLEXA3_PEFC61CWKAAXX_Ser.L_5_1.QSEQ
-rw-r--r--   1 akozik   rwm      3659383821 Mar  2 22:10 100205_SOLEXA3_PEFC61CWKAAXX_Ser.L_5_1.QSEQ.Parsed.trim.fasta
-rw-r--r--   1 akozik   rwm      5607270105 Mar  2 22:10 100205_SOLEXA3_PEFC61CWKAAXX_Ser.L_5_1.QSEQ.Parsed.trim.fastq
-rw-r--r--   1 akozik   rwm      7012301715 Mar  2 22:10 100205_SOLEXA3_PEFC61CWKAAXX_Ser.L_5_1.QSEQ.Parsed.trim.tab
-rw-r--r--   1 akozik   rwm      5163876514 Mar  2 17:49 100205_SOLEXA3_PEFC61CWKAAXX_Ser.L_5_2.QSEQ
-rw-r--r--   1 akozik   rwm      3671460587 Mar  3 01:30 100205_SOLEXA3_PEFC61CWKAAXX_Ser.L_5_2.QSEQ.Parsed.trim.fasta
-rw-r--r--   1 akozik   rwm      5622793924 Mar  3 01:30 100205_SOLEXA3_PEFC61CWKAAXX_Ser.L_5_2.QSEQ.Parsed.trim.fastq
-rw-r--r--   1 akozik   rwm      7034847736 Mar  3 01:30 100205_SOLEXA3_PEFC61CWKAAXX_Ser.L_5_2.QSEQ.Parsed.trim.tab
-rw-r--r--   1 akozik   rwm      5276011118 Mar  2 18:37 100205_SOLEXA3_PEFC61CWKAAXX_Ser.L_6_1.QSEQ
-rw-r--r--   1 akozik   rwm      3701036606 Mar  3 09:45 100205_SOLEXA3_PEFC61CWKAAXX_Ser.L_6_1.QSEQ.Parsed.trim.fasta
-rw-r--r--   1 akozik   rwm      5668449999 Mar  3 09:45 100205_SOLEXA3_PEFC61CWKAAXX_Ser.L_6_1.QSEQ.Parsed.trim.fastq
-rw-r--r--   1 akozik   rwm      7091434693 Mar  3 09:45 100205_SOLEXA3_PEFC61CWKAAXX_Ser.L_6_1.QSEQ.Parsed.trim.tab
-rw-r--r--   1 akozik   rwm      5276011118 Mar  2 18:38 100205_SOLEXA3_PEFC61CWKAAXX_Ser.L_6_2.QSEQ
-rw-r--r--   1 akozik   rwm      3689302274 Mar  3 15:13 100205_SOLEXA3_PEFC61CWKAAXX_Ser.L_6_2.QSEQ.Parsed.trim.fasta
-rw-r--r--   1 akozik   rwm      5647891328 Mar  3 15:13 100205_SOLEXA3_PEFC61CWKAAXX_Ser.L_6_2.QSEQ.Parsed.trim.fastq
-rw-r--r--   1 akozik   rwm      7068472897 Mar  3 15:13 100205_SOLEXA3_PEFC61CWKAAXX_Ser.L_6_2.QSEQ.Parsed.trim.tab
drwxr-xr-x   2 akozik   rwm          482 Mar  2 16:54 qseq_data
-rw-r--r--   1 akozik   rwm         4264 Mar  2 18:12 tcl_solexa_qseq_parser_2010_01_20.tcl

100205_SOLEXA3_PEFC61CWKAAXX_Ser.L_5_1 - 22,598,072  OUT OF  - 25,295,512
100205_SOLEXA3_PEFC61CWKAAXX_Ser.L_5_2 - 22,716,970  OUT OF  - 25,295,512

100205_SOLEXA3_PEFC61CWKAAXX_Ser.L_6_1 - 22,887,282  OUT OF  - 25,840,439
100205_SOLEXA3_PEFC61CWKAAXX_Ser.L_6_2 - 22,850,408  OUT OF  - 25,840,439